Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015812849.1_cds_XP_016497312.1_11453
CDS Infomation

[gene=LOC107816139] [db_xref=GeneID:107816139] [protein=glucan endo-1,3-beta-glucosidase 4] [protein_id=XP_016497312.1] [location=complement(join(13230..13380,13468..13495,14076..15323,15551..15623))] [gbkey=CDS]
Sequence

ATGCTTCTGATGATGCTCAAACCGTGGCTTGCGATATCCATACTATTTTCTTTCCTCATC
TCAAATGTAATAGGTGCATTTGTTGGAATAAACATTGGCACCGATGTTTCAAATTTACCG
CCAGCTTCGGATGTGGTTGCACTCCTTAAAGCTAATCAAATAACTCATGTGCGCCTATTT
AATGCTGATGCTCATATGTTGAATGCGTTAGCCAACTCTAGTATCGAAGTTGTTATCGGT
GTTACAAATGATGAGGTCTTAGGGATCGGAGAATCTCCATCAGCTGCAGCTGCTTGGGTA
AATAAAAATGTAGCAGCTTACATTCCCTCTACAAATATTACGGCTATTGCCGTGGGTAGT
GAAGTTCTCACCGCAATCCCAAACGCTGCACCGGTTTTGGTTCCTGCTATGAATTACTTG
CATAAAGCATTGGTTGCTTCACAACTTAATAACCAAGTTAAAGTTTCAACCCCGCAATCA
ATGGACGTGATTGCTAGGGCATTTCCTCCTTCCACTGCCACTTTCAATTCTTCTTGGAAC
TCAACAATCTTCCAGATCCTTCAGTTTCTAAGAAACACAAACTCATACTTCATGTTGAAT
GCTTATCCATATTATGAATATGTTCACTCTGATGGAATCTTTCCGATTGAATATGCCCTT
TTCCAACCACTCTCCACAGTGAAGCAAATTGTTGATCCAAACACCCTGTTTCACTATGTA
AGTATGTTTGATGCTTTAGTTGATGCTGCATACAACTCTATAGCAGCCCTCAACTTTTCA
GATATCCCAATCGTTGTGACCGAGACTGGTTGGCCGTGGGATGGTGGTGCCAATGAGCCC
GATGCTACTAAGGAAAATGCGGAAACTTTTAACAATAACCTGATTCGGCGTGTTTCAAAT
GATACAGGTCCACCTAGTCAACCTAAAAATCCCATTGACACCTTTATTTATGAGATGTTC
AATGAAGACAAAAGACCTGGACCGATATCGGAAAGAAGCTGGGGTATCTTTTCTATAAAT
GGGAGCGAGGTTTATTCCCTTAGCCTAGGTTCCTCGGGCGGCATCTCTGACAATTCTACT
GCAGTTTTCTGTATAGCAAAAAAGGGTGCAGATGAGAACAAATTGCAAGATGGAATTAAC
TGGGCTTGTGGCCAGGGACATGCTAATTGCAGTGCTATTCAATCTGGGCAGCCTTGTTAT
TTTCCAGATACATTGCAAAATCATGCTTCTTACGCTTACAATGACTATTATCAGAGAATG
CGTAGTGTTGGTGGAACATGTGATTTTGATGATACAGCAACAACGACAACACAAGATCCA
AGTTCCAAAACATGTAAATTTACAGGAAGTTCGACTCCAGGTGGGCTTTTCCCTCCGGCA
GCATTTGGACCTATCAGTCCGACATCTCAGAGTTCAACGATTCGAGCATCTGTTATCGTG
TATACATTGGCTGTATTTTCTGCTTTGTTGATGCTTGATGTGAATGTGCATTTTGTTTAA

Peptide Sequence

PEP ID

XP_016497312.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase 4 [Nicotiana tabacum]
Sequence

MLLMMLKPWLAISILFSFLISNVIGAFVGINIGTDVSNLPPASDVVALLKANQITHVRLF
NADAHMLNALANSSIEVVIGVTNDEVLGIGESPSAAAAWVNKNVAAYIPSTNITAIAVGS
EVLTAIPNAAPVLVPAMNYLHKALVASQLNNQVKVSTPQSMDVIARAFPPSTATFNSSWN
STIFQILQFLRNTNSYFMLNAYPYYEYVHSDGIFPIEYALFQPLSTVKQIVDPNTLFHYV
SMFDALVDAAYNSIAALNFSDIPIVVTETGWPWDGGANEPDATKENAETFNNNLIRRVSN
DTGPPSQPKNPIDTFIYEMFNEDKRPGPISERSWGIFSINGSEVYSLSLGSSGGISDNST
AVFCIAKKGADENKLQDGINWACGQGHANCSAIQSGQPCYFPDTLQNHASYAYNDYYQRM
RSVGGTCDFDDTATTTTQDPSSKTCKFTGSSTPGGLFPPAAFGPISPTSQSSTIRASVIV
YTLAVFSALLMLDVNVHFV

Transcript Sequence

Gene sequence data has not been registered.